Name: International Symposium on Grids & Clouds 2018 (ISGC 2018) in conjunction with Frontiers in Computational Drug Discovery (FCDD)
Start: 2018-03-16T08:00:00+08:00
End: 2018-03-23T18:00:00+08:00
Location: Academia Sinica

Monday, 19 March 2018
09:00
09:00 - 10:30
Room: Conference Room 1, BHSS
Contributions

09:00 Introduction - Stephan HACHINGER

09:15 Remote Sensing for Disaster Mitigation in Taiwan - Cynthia LIU NY Chen (NSPO, Taiwan)

09:55 Storm Surge Modeling and Case Study of 2013 Super Typhoon Haiyan - Yu-Lin TSAI (NCU)
09:00 - 10:30
Room: Auditorium, BHSS
Contributions

09:00 Introduction - David Kelsey (STFC-RAL)

09:15 The Threat Landscape: Introducing terms in context of ENISA’s Threat Landscape Underground economy - Fyodor YAROCHKIN (Academia Sinica)
09:00 - 10:30
Room: Conference Room 2, BHSS
Contributions

09:00 Quantum mechanical/molecular mechanical molecular dynamics simulations - Yingkai ZHANG
09:00 - 10:30
Room: Media Conference Room, BHSS
Contributions

09:00 Defining the Realm of Learning in Life - Maki OKUNUKI Ti-Chuang CHIANG Tosh Yamamoto (Kansai University)

09:30 Concepts surrounding Learning Analytics - Stephen YOUNG

10:00 Demo - Minoru NAKAZAWA
10:30 Coffee Break
Coffee Break
10:30 - 11:00
11:00
11:00 - 12:30
Room: Conference Room 1, BHSS
Contributions

11:00 Regional Collaboration on Disaster Mitigation - Eric YEN (ASGC)

11:15 Case Study of Philippine - Jay Samuel Combinido (Department of Science and Technology -- Advanced Science and Technology Institute)

11:35 Case Study of Indonesia - Basuki SUHARDIMAN

11:55 Case Study of Malaysia - Suhaimi NAPIS

12:15 Interoperation with EOSC-Hub Framework - Ludek Matyska (CESNET)
11:00 - 12:30
Room: Auditorium, BHSS
Contributions

11:00 Malware Techniques - U. KAILA (CSC)

11:45 Demonstration of typical attacks on FedCLoud Virtual Machines - Sven Gabriel (Nikhef/EGI)
11:00 - 12:30
Room: Conference Room 2, BHSS
Contributions

11:00 Hands-on Tutorial of AMBER16 (sqm, sander, pmemd) - Ching-Yu CHOU
11:00 - 12:30
Room: Media Conference Room, BHSS
Contributions

11:00 Second Language Writing for Meta Cognitive Reflection - Yuri KITE

11:20 Reflective Writing enhanced with ICT - Masaki WATANABE

11:40 Learning Analytics or Assessment for Active Learning (PBL/TBL) - Maki OKUNUKI Ti-Chuang CHIANG Tosh Yamamoto (Kansai University)

12:10 Wrapping Up: Summary - Maki OKUNUKI Ti-Chuang CHIANG Tosh Yamamoto (Kansai University)
12:30 Lunch
Lunch
12:30 - 14:00
14:00
14:00 - 15:30
Room: Conference Room 1, BHSS
Contributions

14:00 Environmental Computing - Stephan HACHINGER

14:30 Science & Technology – Hydroinformatics Implementation for Water Related Disasters in Thailand (Remote Presentation) - Veerachai TANPIPAT

15:00 EOSC-Hub Project (Remote Presentation) - Gergely SIPOS
14:00 - 15:30
Room: Media Conference Room, BHSS
Contributions

14:00 Discussion and Hands-on of operational security for Cloud User Communities – session 1 - Sven Gabriel (Nikhef/EGI) U. KAILA (CSC)
14:00 - 15:30
Room: Conference Room 2, BHSS
Contributions

14:00 Potential of mean force and free energy calculations - Jung-Hsin LIN

14:50 Gaussian accelerated molecular dynamics simulation (GaMD) - Yinglong MIAO
15:30 Coffee Break
Coffee Break
15:30 - 16:00
16:00
16:00 - 17:30
Room: Conference Room 1, BHSS
Contributions

16:00 DRIHM WRF Portal (Remote Presentation) - Antonio PARODI

16:30 Case Study of Vietnam (Remote Presentation) - Nam THOAI

17:00 Discussion - Eric YEN
16:00 - 17:30
Room: Media Conference Room, BHSS
Contributions

16:00 Discussion and Hands-on – session 2 - Sven Gabriel (Nikhef/EGI) U. KAILA (CSC)

17:20 Wrap up/conclusions - David Kelsey (STFC-RAL)
16:00 - 18:00
Room: Conference Room 2, BHSS
Contributions

16:00 Hand-on Tutorial of AMBER16 (sander, pmemd, WHAM, UI) and Gaussian accelerated molecular dynamics (GaMD) - Ching-Yu CHOU Yinglong MIAO
Tuesday, 20 March 2018
09:00 I
I
09:00 - 10:30
Room: Auditorium, BHSS
Contributions

09:00 Opening Remarks - Ludek Matyska (CESNET) Simon C. Lin (ASGC)

09:10 The European Open Cloud for e-Science towards automation, service composition, big data analytics and new frontiers in data management - Davide SALOMONI (INFN)

09:50 Applying deep learning to the prediction of protein structure and function - David JONES (UCL)
10:30 Coffee Break
Coffee Break
10:30 - 11:00
11:00 I
I
11:00 - 12:30
Room: Conference Room 1, BHSS
Contributions

11:00 Management of Cost Effective Mass Storage Environments - Tim Chou (Brookhaven National Laboratory)

11:30 Progress on Machine and Deep Learning applications in CMS Computing - Daniele Bonacorsi (University of Bologna)

12:00 What goes up must go down: A case study from RAL on the process of shrinking an existing storage service - Rob Appleyard (STFC)
11:00 - 12:30
Room: Auditorium, BHSS
Contributions

11:00 HADDOCK goes small molecules. Integrative modelling of biomolecular interactions from fuzzy data - Alexandre M.J.J. Bonvin (Utrecht University)

11:45 Computaional Modulator Design to Target Protein-Protein Interactions - Yingkai ZHANG (New York University)
11:00 - 12:30
Room: Media Conference Room, BHSS
Contributions

11:00 Unified Account Management for High Performance Computing as a Service with Microservice Architecture - Rongqiang Cao (Computer Network Information Center, Chinese Academy of Sciences)

11:30 DODAS: How to effectively exploit heterogeneous clouds for scientific computations - Daniele spiga (INFN-PG)

12:00 Workload management for heterogeneous multi-community grid infrastructures - Andrei Tsaregorodtsev (CPPM-IN2P3-CNRS)
I
I
11:00 - 13:00
Room: Conference Room 2, BHSS
Contributions

11:00 eScience Activities in Thailand - Chalee VORAKULPIPAT

11:20 eScience Activities in Indonesia - Basuki SUHARDIMAN

11:40 eScience Activity in Malaysia - Suhaimi NAPIS

12:00 eScience Activities in Vietnam - Nam THOAI

12:20 eScience Activities in Philippine - Jay Samuel Combinido (Department of Science and Technology -- Advanced Science and Technology Institute)

12:40 Panel Discussion
12:30 Lunch
Lunch
12:30 - 14:00
Room: 4F Recreational Hall, BHSS
14:00
14:00 - 15:30
Room: Media Conference Room, BHSS
Contributions

14:00 Building bridges between services and e-infrastructure in structural biology - Alexandre M.J.J. Bonvin (Utrecht University)

14:30 Bridging artificial intelligence and physics-based docking for better modelling of biomolecular complexes - Li Xue (Utrecht University)

15:00 First-principle-based and data-driven design of therapeutic peptides - Lee-Wei Yang (National Tsing Hua University)
II
II
14:00 - 15:30
Room: Conference Room 1, BHSS
Contributions

14:00 Next Generation Data Management Services: the eXtreme DataCloud project - Daniele Cesini (INFN-CNAF)

14:30 Smart Policy Driven Data Management and Data Federations, enabled by the H2020 eXtreme DataCloud project. - Patrick Fuhrmann (DESY/dCache.org)

15:00 Experiences of hard disk management in a erasure coded 10 petabyte-scale Ceph cluster - Rob Appleyard (STFC)
I
I
14:00 - 15:30
Room: Conference Room 2, BHSS
Contributions

14:00 Creating a trust-group for security information sharing - Romain Wartel (CERN)

14:20 Harnessing the Power of Threat Intelligence in Grids and Clouds: WLCG SOC Working Group - David Crooks (University of Glasgow) Liviu Valsan (CERN)

14:40 Towards cross infrastructure Operational Security in EOSC-hub - Sven Gabriel (Nikhef/EGI)

15:00 FIM4R version 2 - Federated Identity Requirements for Research - David Kelsey (STFC-RAL)
14:00 - 15:30
Room: Auditorium, BHSS
Contributions

14:00 Accelerated Computer Simulations and Drug Discovery of G-Protein-Coupled Receptors - Yinglong MIAO (Kentucky University)

14:45 Principles governing biological Processes: Applications to drug design and drug target identification - Carmay LIM
15:30 Coffee Break
Coffee Break
15:30 - 16:00
16:00
16:00 - 16:40
Room: Auditorium, BHSS
Contributions

16:00 Harnessing structures and dynamics of biomolecules for polypharmacology-based computational drug design" - Jung-Hsin LIN (Academia Sinica)
18:00 Reception
Reception
18:00 - 21:00
Wednesday, 21 March 2018
09:45 II
II
09:45 - 10:30
Room: Auditorium, BHSS
Contributions

09:45 Grid computing and cryo-EM - Matthias WOLF (OIST)
10:30 Coffee Break
Coffee Break
10:30 - 11:00
11:00
11:00 - 12:30
Room: Conference Room 1, BHSS
Contributions

11:00 De-demystifying 2017 Nobel Prize in Chemistry from a structural biologist view - Wei-Hau Chang (Academia Sinica)
I
I
11:00 - 12:30
Room: Media Conference Room, BHSS
Contributions

11:00 Introduction of Soundscape Project - Eric Yen (ASGC)

11:30 Improving biodiversity monitoring through soundscape information retrieval - Yu Tsao (Research Center for Information Technology Innovation, Academia Sinica)

12:00 Monitoring of coral reef ecosystem: an integrated approach of marine soundscape and machine learning - Tzu-Hao Lin (Research Center for Information Technology Innovation, Academia Sinica)
11:00 - 12:30
Room: Room 802, BHSS
Contributions

11:00 Introduction - Ian COLLIER

11:10 Storage Accounting Update - Dimitrios CHRISTIDIS

11:35 IHEP Grid Report - wenjing wu (IHEP)

12:00 Security Report - Romain Wartel (CERN)
II
II
11:00 - 12:40
Room: Conference Room 2, BHSS
Contributions

11:00 Singapore Smart Nation Initiatives Using HPC - John KAN

11:20 eScience Activity in Pakistan - Muhammad Imran (National Centre for Physics)

11:40 eScience Activity in India - Santhosh J (C-DAC)

12:00 Panel Discussion
12:30 Lunch
Lunch
12:30 - 14:00
Room: 4F Recreational Hall, BHSS
14:00
14:00 - 15:30
Room: Conference Room 1, BHSS
Contributions

14:00 EMAN2 (part 1) - Cassie WU (Institute of Biological Chemistry, Academia Sinica) Deli Irene LEE (Institute of Biological Chemistry, Academia Sinica) Shih-Chi LUO (Institute of Biological Chemistry, Academia Sinica) Tzu-Jing YANG (Institute of Biological Chemistry, Academia Sinica) Wei-Cheng HUANG (Institute of Biological Chemistry, Academia Sinica)
II
II
14:00 - 15:30
Room: Conference Room 2, BHSS
Contributions

14:00 Taiwan Earthquake Model: Bring in Earthquake Science to Society - Kuo-Fong MA

14:30 Taiwan Earthquake Science Information System and Crowdsourcing-based Earthquake Reporting Systems - Jian-Cheng LEE

15:00 Development of advanced infrastructure for earthquake science in Taiwan: Taiwan Earthquake Research Center - Wen-Tzong LIANG
14:00 - 15:30
Room: Room 802, BHSS
Contributions

14:00 IPv6 Status - David Kelsey (STFC-RAL)

14:30 Belle II Report - Takanori HARA

15:00 Middleware Report - Erik Mattias WADENSTEIN
I
I
14:00 - 15:30
Room: Media Conference Room, BHSS
Contributions

14:00 Trust Building as a Magnet of Online Survey Participation: How an Open Survey Data Platform Assists Theory Development in Social Sciences - Frank Liu (National Sun Yat-Sen University)

14:30 Responding to Environmental Change: Research Collaborations, Integrated Data Systems, and Deep Mapping - David J. Bodenhamer (Indiana University-Purdue University)

15:00 Complex Negotiations in Agent-Based Modelling (ABM): Insights from Model Building - Shih-Chieh Wang (Taiwan Institute of Economic Research)
15:30 Coffee Break
Coffee Break
15:30 - 16:00
16:00
16:00 - 17:30
Room: Conference Room 1, BHSS
Contributions

16:00 EMAN2 (part 2) - Cassie WU (Institute of Biological Chemistry, Academia Sinica) Deli Irene LEE (Institute of Biological Chemistry, Academia Sinica) Shih-Chi LUO (Institute of Biological Chemistry, Academia Sinica) Tzu-Jing YANG (Institute of Biological Chemistry, Academia Sinica) Wei-Cheng HUANG (Institute of Biological Chemistry, Academia Sinica)
III
III
16:00 - 17:30
Room: Conference Room 2, BHSS
Contributions

16:00 Impacts of Horizontal Resolution and Air–Sea Flux Parameterizations on the Intensity and Structure of Tropical Cyclone - Chuan-Yao Lin (Academia Sinica)

16:30 A Deep Learning Approach to Tropical Cyclone Intensity Estimation Using Satellite-based Infrared Images - Jays Samuel Combinido (Department of Science and Technology -- Advanced Science and Technology Institute)

17:00 Towards a crowdsourcing platform for labelling remote sensing images online - Jianghua Zhao (Computer Network Information Center, Chinese Academy of Sciences)
16:00 - 17:30
Room: Room 802, BHSS
Contributions

16:00 LHCOPN/LHCONE Report - Edoardo MARTELLI

16:30 EISCAT 3D Report - Erik Mattias WADENSTEIN

17:00 AMS Report - Felix LEE
II
II
16:00 - 17:30
Room: Media Conference Room, BHSS
Contributions

16:00 Skill-based Occupation/Job Recommendation system - Ankhtuya Ochirbat (National University of Mongolia)

16:30 Authorship recognition and disambiguation of scientific papers using a neural networks approach - Luca Tomassetti (University of Ferrara and INFN) Sebastiano Fabio Schifano (University of Ferrara and INFN)

17:00 Educational Quality Assurance and Accountability of ICT-Enhanced Higher Education - Developing an SOP for Educational Informatics - - Masaki Watanabe (CTL, Kansai University) Tosh YAMAMOTO (CTL, Kansai University)
18:30 PC & GDB Dinner
PC & GDB Dinner
18:30 - 20:30
Thursday, 22 March 2018
09:00 III
III
09:00 - 10:30
Room: Auditorium, BHSS
Contributions

09:00 Preparing Applications for the New Era of Computing - Erwin LAURE (KTH)

09:45 Challenging Einstein's Theory of General Relativity by Gravitational Waves with Advanced Computing Technologies - Sadakazu HAINO (Institute of Physics, Academia Sinica)
10:30 Coffee Break
Coffee Break
10:30 - 11:00
11:00
11:00 - 12:30
Room: Conference Room 1, BHSS
Contributions

11:00 Relion (part 1) - Cassie WU (Institute of Biological Chemistry, Academia Sinica) Deli Irene LEE (Institute of Biological Chemistry, Academia Sinica) Shih-Chi LUO (Institute of Biological Chemistry, Academia Sinica) Tzu-Jing YANG (Institute of Biological Chemistry, Academia Sinica) Wei-Cheng HUANG (Institute of Biological Chemistry, Academia Sinica)
III
III
11:00 - 12:30
Room: Media Conference Room, BHSS
Contributions

11:00 dCache - running a fault-tolerant storage over public networks - Patrick Fuhrmann (DESY/dCache.org)

11:30 EOS Open Storage - the CERN storage ecosystem for scientific data repositories - Andreas-Joachim Peters (CERN)

12:00 Automatic Extraction of Extended Named Entities from Wikipedia for Conversation Analysis - Daiki Ishizuka (Kanazawa Institute of Technology)
III
III
11:00 - 13:00
Room: Conference Room 2, BHSS
Contributions

11:00 eScience Activities in Japan - Kento Aida (National Institute of Informatics)

11:20 eScience Activities in China - Gang Chen (Institute Of High Energy Physics)

11:40 eScience Activities in Korea - Sang-Un AHN

12:00 eScience Activities in Taiwan - Eric YEN (ASGC)

12:20 eScience Activities in Mongolia - Batzaya ENKHJARGAL (MAS)

12:40 Panel Discussion
12:30 Lunch
Lunch
12:30 - 14:00
Room: 4F Recreational Hall
14:00
14:00 - 15:30
Room: Conference Room 1, BHSS
Contributions

14:00 Relion (part 2) - Cassie WU (Institute of Biological Chemistry, Academia Sinica) Deli Irene LEE (Institute of Biological Chemistry, Academia Sinica) Shih-Chi LUO (Institute of Biological Chemistry, Academia Sinica) Tzu-Jing YANG (Institute of Biological Chemistry, Academia Sinica) Wei-Cheng HUANG (Institute of Biological Chemistry, Academia Sinica)
I
I
14:00 - 15:30
Room: Media Conference Room, BHSS
Contributions

14:00 E-RIHS’ DIGILAB: A data and service infrastructure - Athanasios Koutoupas (The Cyprus Institute) Franco Niccolucci (Vast-Lab Pin S.C.R.L.) Luca Pezzati (Consiglio Nazionale Delle Ricerche) Sorin Hermon (The Cyprus Institute)

14:45 Document Management with ConservationSpace - Mervin Richard (National Gallery of Art)
II
II
14:00 - 15:30
Room: Room 802
Contributions

14:00 Building a large scale Intrusion Detection System using Big Data technologies - Liviu Valsan (CERN)

14:20 Security Situation Assessment Method Based On States Transition - Hanji Shen (Computer Network Information Center of Chinese Academy of Sciences)

14:40 Design and Development of the Platform for Network Traffic Statistics and Analysis - Hao Hu (Institute of High Energy Physics)

15:00 Simulation approach for improving the computing network topology and performance of the China IHEP Data Center - Li Wang (IHEP)
14:00 - 15:50
Room: Conference Room 2, BHSS
Contributions

14:00 Studies on Job Queue Health and Problem Recovery - Xiaowei Jiang (Institute of High Energy Physics, Chinese Academy of Sciences)

14:20 Construction of real-time monitoring system for Grid services based on log analysis at the Tokyo Tier-2 center - Tomoe Kishimoto (University of Tokyo)

14:40 Extending WLCG Tier-2 Resources using HPC and Cloud Solutions - Jiri Chudoba (Institute of Physics of the CAS, Prague)

15:00 A brief history of distributed computing at the LHC - Philippe Charpentier (CERN)

15:30 Exploit the massive Volunteer Computing resource for HEP computation - Wenjing wu (IHEP)
15:30 Coffee Break
Coffee Break
15:30 - 16:00
16:00
16:00 - 17:30
Room: Conference Room 1, BHSS
Contributions

16:00 cryoSPARC - Cassie WU (Institute of Biological Chemistry, Academia Sinica) Deli Irene LEE (Institute of Biological Chemistry, Academia Sinica) Shih-Chi LUO (Institute of Biological Chemistry, Academia Sinica) Tzu-Jing YANG (Institute of Biological Chemistry, Academia Sinica) Wei-Cheng HUANG (Institute of Biological Chemistry, Academia Sinica)
16:00 - 17:30
Room: Conference Room 2, BHSS
Contributions

16:00 Science Gateway on GARUDA GRID for Open Source Drug Discovery (OSDD) community - Santhosh J (C-DAC)

16:30 DevOps adoption in scientific applications: DisVis and PowerFit cases - Alexandre M.J.J. Bonvin (Utrecht University)
II
II
16:00 - 17:30
Room: Media Conference Room, BHSS
Contributions

16:00 Spectral Database Application for Color Compensation Process in Painting - M. James Shyu (Chinese Culture University)

16:30 A DIGITAL MAPPING OF THE MALAY PENINSULA: ISLAM, HINDU AND BUDDHIST PLACES OF WORSHIP - Andrew Howard (National University of Australia) Faridah Mohd. Noor (University of Malaya)
III
III
16:00 - 17:30
Room: Room 802, BHSS
Contributions

16:00 A Study of Credential Integration Model in Academic Research Federation Supporting a Wide Variety of Services - Eisaku Sakane (National Institute of Informatics)

16:30 WLCG Tier-2 site at NCP, Status Update and Future Direction - Muhammad Imran (National Centre for Physics)

17:00 Best practises and experiences in user support –A case study at GARUDA - Santhosh J (C_DAC)
19:45 Gala Dinner
Gala Dinner
19:45 - 21:45
Friday, 23 March 2018
09:00
09:00 - 10:30
Room: Conference Room 1, BHSS
Contributions

09:00 Introduction to Appion and Leginon tools - Chi-Yu Fu
I
I
09:00 - 10:30
Room: Conference Room 2, BHSS
Contributions

09:00 Harvesting dispersed computational resources with Openstack: a Cloud infrastructure for the Computational Science community - Mirko Mariotti (Department of Physics and Geology, University of Perugia)

09:30 Curriculum in the Cloud: Using OpenStack to Transform Computer Science Education - Brent Seales (University of Kentucky) Cody Bumgardner (University of Kentucky)

10:00 Integration and optimization of cloud computing within the BNL workload management system - iris wu (Brookhaven National Lab)
IV
IV
09:00 - 10:30
Room: Auditorium, BHSS
Contributions

09:00 Provenance as a Building Block for an Open Science Infrastructure - Andreas Schreiber (German Aerospace Center)

09:30 CernVM-FS - status and latest developments from RAL Tier-1 perspective - Catalin Condurache (STFC Rutherford Appleton Laboratory)

10:00 Explore New Computing Environment for LHAASO offline data analysis - Qiulan Huang (Institute of High Energy of Physics, Chinese Academy Sciences)
10:30 Coffee Break
Coffee Break
10:30 - 10:50
10:50
10:50 - 12:20
Room: Conference Room 1, BHSS
Contributions

10:50 Computation resources for cryoEM in Academia Sinica and their benchmark - Eric YEN (ASGC) Felix LEE (ASGC)
II
II
10:50 - 12:20
Room: Conference Room 2, BHSS
Contributions

10:50 Data intensive ATLAS workflows in the Cloud - Gerhard Rzehorz (CERN, University of Göttingen)

11:20 Dynamic extension of INFN-CNAF Tier1 Data Center - Antonio Falabella (INFN)

11:50 Integration of GPU and Container with Distributed Cloud for Scientific Applications - Edward WU (ASGC)
V
V
10:50 - 12:20
Room: Auditorium, BHSS
Contributions

10:50 A Simplified SDN-Driven All-Campus Science DMZ - Charles Pike (University of Kentucky)

11:20 Optical Interconnects for Cloud Computing Data Centers: Recent Advances and Future Challenges - Muhammad Imran (National Centre for Physics)

11:50 Modern security landscape in Taiwan - Joy CHAN
12:20
12:20 - 13:15
Room: Auditorium, BHSS
Contributions

12:25 Non-Linear Earthquake Simulation on Sunway TaihuLight - Haohuan FU (Tsinghua University)

13:05 Closing Ceremony
13:15 Lunch
Lunch
13:15 - 14:00